Even with the softer iron then used, I have to believe that if any barrel needed to be freshed out after less than 800 - 1000 shots, it was due to lack of cleaning more than anything else. There would have been a few truly extenuating circumstances that would have precluded cleaning the bore in a timely manner, especially on the frontier.
Just plain old laziness no doubt figures into the equation as well.
Then, as now, some people who have depended on their firearms for life and livelihood have failed to take proper firearms maintenance seriously.
I can only offer a single anecdotal example from personal experience on this subject. As a younger teenager in the early 1970's I hunted and target practiced extensively with an original Tennessee- type .31 caliber iron barrelled original full stock percussion rifle that may have been flint before it came into the possession of my GG Grandfather as an old gun in the mid- 1880's. The bore was not perfect, but was pretty good, with seven fairly deep square-bottomed grooves (We even had the original bullet mold). And it was pretty accurate. I would guess that I put somewhere between 300 - 500 shots through it myself with no noticeable loss of accuracy. I don't know how many times my ancestors fired it.
According to my great- grandfather (died in 1975 at age 91) the gun was in fairly regular use up through the 1940's, and was never rebarreled or freshed out.